Description

forkhead box C1 [Source:HGNC Symbol;Acc:HGNC:3800]

Synonyms

ARA, FKHL7, FREAC3, IGDA, IHG1, IRID1

Location
Gene

This transcript is a product of gene ENSG00000054598

This gene has 1 transcript (splice variant) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
FOXC1-001ENST000003808743926553 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4473C6KMR8 FOXC1-001 Q12948
W6CJ52
NM_001453
NP_001444
TSL:NA

TSL:NA:The transcript was not analyzed for one of the following reasons:

  • Pseudogene annotation, including transcribed pseudogenes
  • Human leukocyte antigen (HLA) transcript
  • Immunoglobin gene transcript
  • T-cell receptor transcript
  • Single-exon transcript (will be included in a future version)

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 1 Coding exons: 1 Transcript length: 3,926 bps Translation length: 553 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4473

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12948

Transcript Support Level

NA

Ensembl version

ENST00000380874.3

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays