Human (GRCh38.p14)
Description

LIM domain and actin binding 1 [Source:HGNC Symbol;Acc:HGNC:24636]

Gene Synonyms

EPLIN

Location
About this transcript

This transcript has 11 exons, is annotated with 30 domains and features, is associated with 45201 variant alleles and maps to 580 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000341247.9LIMA1-2013680759aaENSP00000340184.4
 
Protein coding
CCDS8802Q9UHB6-1 NM_016357.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
ENST00000547825.5LIMA1-2033920457aaENSP00000448706.1
 
Protein coding
CCDS58230Q9UHB6-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000394943.7LIMA1-2023669760aaENSP00000378400.3
 
Protein coding
CCDS44877Q9UHB6-4 -GENCODE basicAPPRIS P3TSL:1
ENST00000552783.5LIMA1-2143612600aaENSP00000448779.1
 
Protein coding
CCDS55826Q9UHB6-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000552823.5LIMA1-2153254599aaENSP00000450266.1
 
Protein coding
Q9UHB6-2 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000552491.5LIMA1-2122652456aaENSP00000448463.1
 
Protein coding
F8VS07 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000552909.5LIMA1-2162162598aaENSP00000450087.1
 
Protein coding
F8VQE1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000551691.5LIMA1-208583130aaENSP00000447975.1
 
Protein coding
F8VTU2 -TSL:3CDS 3' incomplete
ENST00000550592.1LIMA1-205567111aaENSP00000449890.1
 
Protein coding
F8VVQ7 -TSL:4CDS 3' incomplete
ENST00000552720.5LIMA1-2132457388aaENSP00000448411.1
 
Nonsense mediated decay
F8VRN8 -TSL:1
ENST00000552008.5LIMA1-209566No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000552338.5LIMA1-211555No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000550611.1LIMA1-206543No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000549064.1LIMA1-204648No protein-
 
Retained intron
--TSL:2
ENST00000551486.1LIMA1-207587No protein-
 
Retained intron
--TSL:2
ENST00000552045.1LIMA1-210386No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 11, Coding exons: 10, Transcript length: 3,680 bps, Translation length: 759 residues

MANE

This MANE Select transcript contains ENSP00000340184 and matches to NM_016357.5 and NP_057441.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHB6

CCDS

This transcript is a member of the Human CCDS set: CCDS8802

Transcript Support Level (TSL)

TSL:1

Version

ENST00000341247.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.