Description

jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]

Synonyms

JADE-2, KIAA0239, PHF15

Gene

This transcript is a product of gene ENSG00000043143

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
JADE2-002ENST000003950036465 bp790 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4176C9J929 D6R9B8 Q9NQC1
NM_001289984
NM_015288
NP_001276913
NP_056103
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
JADE2-001ENST000003618953212 bp791 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J929 D6R9B8 Q9NQC1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
JADE2-007ENST000004028352797 bp509 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B5MBX1 C9J929 D6R9B8
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
JADE2-003ENST000002826052748 bp834 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3KPL2 C9J929 D6R9B8
G3XAA4
NP_001276914
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
JADE2-201ENST000006128301251 bp246 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
JADE2-008ENST00000431355887 bp255 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J929 D6R9B8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
JADE2-011ENST00000512386567 bp149 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9B8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
JADE2-006ENST000004300871256 bp47 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
JADE2-010ENST00000515554549 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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JADE2-009ENST00000453515548 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
JADE2-004ENST000004708762997 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 11 Coding exons: 10 Transcript length: 6,465 bps Translation length: 790 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4176

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQC1

Ensembl version

ENST00000395003.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays