Description

macrophage scavenger receptor 1 [Source:HGNC Symbol;Acc:7376]

Location
Gene

This transcript is a product of gene ENSG00000038945

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
MSR1-201ENST000003508963572ENSP00000262100388Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS5996YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-003ENST000003819982826ENSP00000371428358Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS5997YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-001ENST000002621012132ENSP00000262101451Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS5995YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-002ENST000003552821167ENSP00000347430388Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS5996YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-004ENST000004455061513ENSP00000405453469Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-202ENST00000536385955ENSP00000444414132Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-006ENST00000522672695ENSP00000430536149Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
MSR1-007ENST00000518026530ENSP0000042949858Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
MSR1-008ENST00000518960353ENSP0000042790564Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
MSR1-005ENST000005190601009ENSP0000042886537Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
MSR1-010ENST00000518343597No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
MSR1-011ENST00000521876540No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
MSR1-009ENST00000522130489No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
MSR1-013ENST00000517522403No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
MSR1-012ENST00000520846373No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,513 bps Translation length: 469 residues

Ensembl version

ENST00000445506.2

Type

Putative protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000375985 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays