Description

calcium-sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]

Synonyms

FHH, GPRC2A, HHC, HHC1, NSHPT

Gene

This transcript is a product of gene ENSG00000036828

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CASR-002ENST0000049861950171088 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54632E7ENE0 Q2F3K2 Q2F3K3
Q2F3K4 Q2F3K5 Q2F3K6
NM_001178065
NP_001171536
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CASR-001ENST0000049013137831078 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3010P41180 Q2F3K3 Q2F3K4
Q2F3K5 Q2F3K6
NM_000388
NP_000379
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CASR-003ENST00000490186602No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 7 Coding exons: 6 Transcript length: 5,017 bps Translation length: 1,088 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54632

Transcript Support Level

1

Ensembl version

ENST00000498619.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays