Description

calcium-sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]

Synonyms

FHH, GPRC2A, HHC, HHC1, NSHPT

Gene

This transcript is a product of gene ENSG00000036828

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CASR-002ENST0000049861950171088 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54632CASR-002 E7ENE0 Q2F3K2
Q2F3K3 Q2F3K4 Q2F3K5
Q2F3K6
NM_001178065
NP_001171536
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CASR-001ENST0000049013137831078 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3010CASR-001 P41180 Q2F3K3
Q2F3K4 Q2F3K5 Q2F3K6
NM_000388
NP_000379
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CASR-003ENST00000490186602No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-CASR-003 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 7 Coding exons: 6 Transcript length: 3,783 bps Translation length: 1,078 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS3010

Uniprot

This transcript corresponds to the following Uniprot identifiers: P41180

Transcript Support Level

1

Ensembl version

ENST00000490131.3

Type

Known protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays