Description

ornithine carbamoyltransferase [Source:HGNC Symbol;Acc:HGNC:8512]

Location
About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 681 variations and maps to 11 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
OTC-001ENST000000390071585354aaENSP00000039007
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14247P00480 NM_000531
NP_000522
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
OTC-002ENST00000488812627No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,585 bps Translation length: 354 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS14247

Uniprot

This transcript corresponds to the following Uniprot identifiers: P00480

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000039007.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays