Description

ATPase, H+ transporting, lysosomal V0 subunit a1 [Source:HGNC Symbol;Acc:HGNC:865]

Synonyms

a1, ATP6N1, ATP6N1A, Stv1, Vph1, VPP1

Location
Gene

This transcript is a product of gene ENSG00000033627

This gene has 25 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ATP6V0A1-006ENST000003436194128 bp837 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45684B7Z2J9 F5H1T6 K7ELZ6
K7EM24 Q93050
NM_001130021
NP_001123493
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP6V0A1-004ENST000002646494110 bp838 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45683K7ELZ6 K7EM24 Q93050
NM_001130020
NP_001123492
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP6V0A1-001ENST000003938293028 bp831 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11426K7ELZ6 K7EM24 Q93050
NM_005177
NP_005168
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP6V0A1-201ENST000005441373047 bp483 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H1T6 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP6V0A1-003ENST000005377282774 bp788 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7Z641 K7ELZ6 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP6V0A1-005ENST000005855252679 bp794 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7Z2A9 B7Z2J9 F5H1T6
K7ELZ6
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATP6V0A1-025ENST00000586201881 bp188 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7ERA6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP6V0A1-014ENST00000589727664 bp198 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EPG4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP6V0A1-017ENST00000592324585 bp195 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7EN36 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP6V0A1-013ENST00000589213580 bp93 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7ELZ6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP6V0A1-022ENST00000588138573 bp191 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7ENA1 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATP6V0A1-012ENST00000587824554 bp130 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-K7ELZ6 K7EM24 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATP6V0A1-015ENST00000588901589 bp68 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-K7EQW2 -
ATP6V0A1-023ENST00000587510564 bp129 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ATP6V0A1-010ENST000005877971878 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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ATP6V0A1-027ENST000005872991000 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATP6V0A1-020ENST00000589759502 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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ATP6V0A1-009ENST000005928314652 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-007ENST000005858282139 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-002ENST000005886291797 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-024ENST00000588806842 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-019ENST00000587882780 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-016ENST00000586001587 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-018ENST00000587375546 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATP6V0A1-021ENST00000586315357 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 22 Coding exons: 21 Transcript length: 4,128 bps Translation length: 837 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45684

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q93050

Ensembl version

ENST00000343619.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays