Human (GRCh38.p14)
Description

solute carrier family 11 member 1 [Source:HGNC Symbol;Acc:HGNC:10907]

Gene Synonyms

LSH, NRAMP, NRAMP1

About this transcript

This transcript has 15 exons, is annotated with 29 domains and features, is associated with 7540 variant alleles and maps to 810 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000233202.11SLC11A1-2013608550aaENSP00000233202.6
 
Protein coding
CCDS2415P49279-1 NM_000578.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000354352.9SLC11A1-2022136163aaENSP00000346320.5
 
Nonsense mediated decay
Q9HBK0 -TSL:1
ENST00000539932.5SLC11A1-218176582aaENSP00000443435.2
 
Nonsense mediated decay
A0A0A0MTL3 -TSL:1
ENST00000473367.5SLC11A1-21062490aaENSP00000484905.1
 
Nonsense mediated decay
A0A087X2D6 -TSL:4
ENST00000481524.5SLC11A1-21242141aaENSP00000483970.1
 
Nonsense mediated decay
A0A087X181 -TSL:4
ENST00000468221.5SLC11A1-2055772No protein-
 
Retained intron
--TSL:1
ENST00000465984.5SLC11A1-2042548No protein-
 
Retained intron
--TSL:2
ENST00000469449.1SLC11A1-2072435No protein-
 
Retained intron
--TSL:2
ENST00000494322.5SLC11A1-2171781No protein-
 
Retained intron
--TSL:1
ENST00000475225.5SLC11A1-2111602No protein-
 
Retained intron
--TSL:2
ENST00000490536.1SLC11A1-2141057No protein-
 
Retained intron
--TSL:3
ENST00000492413.5SLC11A1-216975No protein-
 
Retained intron
--TSL:2
ENST00000469799.5SLC11A1-208695No protein-
 
Retained intron
--TSL:3
ENST00000471875.5SLC11A1-209573No protein-
 
Retained intron
--TSL:4
ENST00000490872.1SLC11A1-215550No protein-
 
Retained intron
--TSL:4
ENST00000483487.2SLC11A1-213498No protein-
 
Retained intron
--TSL:4
ENST00000468721.1SLC11A1-206358No protein-
 
Retained intron
--TSL:3
ENST00000460592.1SLC11A1-203275No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 15, Coding exons: 15, Transcript length: 3,608 bps, Translation length: 550 residues

MANE

This MANE Select transcript contains ENSP00000233202 and matches to NM_000578.4 and NP_000569.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49279

CCDS

This transcript is a member of the Human CCDS set: CCDS2415

Transcript Support Level (TSL)

TSL:1

Version

ENST00000233202.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.