Human (GRCh38.p14)
Description

ATPase secretory pathway Ca2+ transporting 1 [Source:HGNC Symbol;Acc:HGNC:13211]

Gene Synonyms

ATP2C1A, BCPM, KIAA1347, PMR1, SPCA1

About this transcript

This transcript has 3 exons, is associated with 2049 variant alleles and maps to 80 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000510168.6ATP2C1-2184994919aaENSP00000427461.1
 
Protein coding
CCDS46914P98194-1 NM_001378687.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:5
ENST00000508532.5ATP2C1-2144969919aaENSP00000424783.1
 
Protein coding
CCDS46914P98194-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000505330.5ATP2C1-2104888953aaENSP00000423774.2
 
Protein coding
CCDS75006B4E2Q0 -GENCODE basicTSL:2
ENST00000428331.6ATP2C1-2044795919aaENSP00000395809.2
 
Protein coding
CCDS46914P98194-1 -GENCODE basicAPPRIS P3TSL:1
ENST00000504948.5ATP2C1-2084714903aaENSP00000423330.1
 
Protein coding
CCDS56281P98194-4 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000533801.6ATP2C1-2243690888aaENSP00000432956.3
 
Protein coding
CCDS46913P98194-2 -GENCODE basicTSL:1
ENST00000507488.6ATP2C1-2123579973aaENSP00000421326.3
 
Protein coding
CCDS56278P98194-7 -GENCODE basicTSL:2
ENST00000504381.5ATP2C1-2053498944aaENSP00000425320.2
 
Protein coding
CCDS56279P98194-8 -GENCODE basicTSL:2
ENST00000328560.12ATP2C1-2013484888aaENSP00000329664.8
 
Protein coding
CCDS46913P98194-2 -GENCODE basicTSL:1
ENST00000513801.5ATP2C1-2213439923aaENSP00000422872.1
 
Protein coding
CCDS56280P98194-3 -GENCODE basicTSL:1
ENST00000359644.7ATP2C1-2023401949aaENSP00000352665.3
 
Protein coding
CCDS33856P98194-9 -GENCODE basicTSL:1
ENST00000422190.6ATP2C1-2033386939aaENSP00000402677.2
 
Protein coding
CCDS46912P98194-5 -GENCODE basicTSL:1
ENST00000504612.5ATP2C1-2073148903aaENSP00000425228.1
 
Protein coding
H0Y9V7 -TSL:2CDS 5' incomplete
ENST00000508660.5ATP2C1-215943314aaENSP00000424930.1
 
Protein coding
H0Y9S7 -TSL:5CDS 5' and 3' incomplete
ENST00000515854.5ATP2C1-223561131aaENSP00000422890.1
 
Protein coding
D6R9U9 -TSL:4CDS 3' incomplete
ENST00000509662.5ATP2C1-217559102aaENSP00000426849.1
 
Protein coding
D6REJ1 -TSL:4CDS 3' incomplete
ENST00000505072.5ATP2C1-209556120aaENSP00000427625.1
 
Protein coding
D6RHV9 -TSL:4CDS 3' incomplete
ENST00000508297.2ATP2C1-21354082aaENSP00000421261.1
 
Protein coding
D6RGE9 -TSL:4CDS 3' incomplete
ENST00000504571.5ATP2C1-206786215aaENSP00000422489.1
 
Nonsense mediated decay
H0Y8X9 -TSL:3CDS 5' incomplete
ENST00000507194.1ATP2C1-21165150aaENSP00000427087.1
 
Nonsense mediated decay
H0YAH2 -TSL:3CDS 5' incomplete
ENST00000509150.1ATP2C1-216573No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000514654.5ATP2C1-2224730No protein-
 
Retained intron
--TSL:1
ENST00000513636.1ATP2C1-220590No protein-
 
Retained intron
--TSL:4
ENST00000510774.1ATP2C1-219555No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 3, Coding exons: 0, Transcript length: 573 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000509150.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.