Description

ATPase, Ca++ transporting, type 2C, member 1 [Source:HGNC Symbol;Acc:13211]

Gene

This transcript is a product of gene ENSG00000017260

This gene has 25 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
ATP2C1-008ENST000005101685067ENSP00000427461919Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS46914YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-001ENST000005085324969ENSP00000424783919Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS46914YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-009ENST000005053304888ENSP00000423774903Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56281YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-011ENST000004283314795ENSP00000395809919Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS46914YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-004ENST000005049484714ENSP00000423330903Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56281YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-010ENST000005074883579ENSP00000421326923Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56280YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-002ENST000003285603484ENSP00000329664888Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS46913YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-201ENST000003932213446ENSP00000376914973Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56278YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-003ENST000005138013439ENSP00000422872923Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56280YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-005ENST000003596443401ENSP00000352665949Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS33856YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-020ENST000004221903386ENSP00000402677939Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS46912YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-202ENST000005338013277ENSP00000432956944Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56279YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-007ENST000005043813498ENSP00000425320894Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-006ENST000005046123148ENSP00000425228903Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
ATP2C1-017ENST00000508660943ENSP00000424930314Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
ATP2C1-019ENST00000515854561ENSP00000422890131Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
ATP2C1-014ENST00000509662559ENSP00000426849102Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
ATP2C1-021ENST00000505072556ENSP00000427625120Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
ATP2C1-015ENST00000508297540ENSP0000042126182Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
ATP2C1-013ENST00000504571786ENSP00000422489215Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
ATP2C1-018ENST00000507194651ENSP0000042708750Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'--
ATP2C1-023ENST00000509150573No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
ATP2C1-012ENST000005146544730No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
ATP2C1-016ENST00000513636590No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
ATP2C1-022ENST00000510774555No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 27 Coding exons: 27 Transcript length: 3,484 bps Translation length: 888 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46913

Ensembl version

ENST00000328560.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000356642 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays