Description

matrin 3 [Source:HGNC Symbol;Acc:HGNC:6912]

Synonyms

KIAA0723, MGC9105, MPD2, VCPDM

Gene

This transcript is a product of gene ENSG00000015479

This gene has 48 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
MATR3-201ENST000003610595604 bp847 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4210B3KM87 D6R8Z5 D6R991
D6R9F3 D6RAM9 D6RAY2
D6RB45 D6RBI2 D6RBK5
D6RBS2 D6RCM3 D6RE02
D6REK4 D6RGW7 P43243
Q9H4N1
NM_001194954
NM_199189
NP_001181883
NP_954659
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-202ENST000006184415282 bp847 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4210B3KM87 D6R8Z5 D6R991
D6R9F3 D6RAM9 D6RAY2
D6RB45 D6RBI2 D6RBK5
D6RBS2 D6RCM3 D6RE02
D6REK4 D6RGW7 Q9H4N1
NM_001194955
NP_001181884
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-002ENST000003948054843 bp847 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4210B3KM87 D6R8Z5 D6R991
D6R9F3 D6RAM9 D6RAY2
D6RB45 D6RBI2 D6RBK5
D6RBS2 D6RCM3 D6RE02
D6REK4 D6RGW7 P43243
Q9H4N1
NM_018834
NP_061322
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-013ENST000005099903249 bp847 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4210B3KM87 D6R8Z5 D6R991
D6R9F3 D6RAM9 D6RAY2
D6RB45 D6RBI2 D6RBK5
D6RBS2 D6RCM3 D6RE02
D6REK4 D6RGW7 P43243
Q9H4N1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-008ENST000005038112518 bp559 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54908B3KM87 D6RAM9 D6RAY2
D6RBI2 D6RBK5 D6RE02
P43243 Q9H4N1
NM_001194956
NP_001181885
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-001ENST000003948005513 bp895 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8MXP9 D6R8Z5 D6R991
D6R9F3 D6RAM9 D6RAY2
D6RB45 D6RBI2 D6RBK5
D6RBS2 D6RCM3 D6RE02
D6REK4 D6RGW7
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-003ENST000005029294373 bp895 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8MXP9 D6R8Z5 D6R991
D6R9F3 D6RAM9 D6RAY2
D6RB45 D6RBI2 D6RBK5
D6RBS2 D6RCM3 D6RE02
D6REK4 D6RGW7
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-203ENST000006209163134 bp283 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q68E03 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-009ENST000005100563040 bp794 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R8Z5 D6R991 D6R9F3
D6RAM9 D6RAY2 D6RB45
D6RBI2 D6RBK5 D6RBS2
D6RCM3 D6RE02 D6REK4
D6REM6 D6RGW7
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-010ENST000005024992664 bp509 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3KM87 D6RAM9 D6RAY2
D6RBI2 D6RBK5 D6RE02
Q9H4N1
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-012ENST000005042032243 bp509 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B3KM87 D6RAM9 D6RAY2
D6RBI2 D6RBK5 D6RE02
Q9H4N1
NM_001282278
NP_001269207
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MATR3-011ENST000005040451530 bp433 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R8Z5 D6R991 D6R9F3
D6RAM9 D6RAY2 D6RB45
D6RBS2 D6RCM3 D6REK4
D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-036ENST000005158331001 bp334 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAM9 D6RAY2 D6RBI2
D6RBK5 D6RE02
-CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
MATR3-045ENST00000504023770 bp78 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9F3 D6RB45 D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-025ENST00000509644750 bp81 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAM9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-044ENST00000503340696 bp87 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9F3 D6RB45 D6RBS2
D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-017ENST00000505016664 bp47 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RB45 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-026ENST00000502394589 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9F3 D6RB45 D6RBS2
D6RCM3 D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-024ENST00000514694587 bp107 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R8Z5 D6R9F3 D6RB45
D6RBS2 D6RCM3 D6REK4
D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-018ENST00000506147580 bp63 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9N0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-019ENST00000512107579 bp6 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-028ENST00000512876575 bp125 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAM9 D6RAY2 D6RBI2
D6RE02
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-043ENST00000514488564 bp100 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9F3 D6RB45 D6RBS2
D6RCM3 D6REK4 D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-032ENST00000508689561 bp78 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R9F3 D6RB45 D6RGW7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-033ENST00000514528532 bp172 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAM9 D6RAY2 D6RIA2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-046ENST00000511378455 bp9 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-034ENST00000511249447 bp121 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RBK5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-035ENST00000513678444 bp86 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAM9 D6RAY2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-029ENST00000504311423 bp109 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RAM9 D6RAY2 D6RBI2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
MATR3-041ENST00000512040642 bp184 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0Y8S1 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
MATR3-027ENST00000507197865 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-021ENST00000506188801 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-016ENST00000505522629 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--NR_036536
MATR3-037ENST00000511978573 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-020ENST00000448190542 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-023ENST00000513259444 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-039ENST00000509918377 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-014ENST00000508735310 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
MATR3-005ENST000005056257306 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-007ENST000005046432560 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-004ENST000005024222250 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-015ENST00000514110679 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--NR_003141
MATR3-022ENST00000507692575 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-031ENST00000513121573 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-030ENST00000507860571 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-040ENST00000511333558 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-038ENST00000514402556 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
MATR3-042ENST00000502944362 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 17 Coding exons: 14 Transcript length: 3,249 bps Translation length: 847 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4210

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43243

Ensembl version

ENST00000509990.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays