Description

calcium binding and coiled-coil domain 1 [Source:HGNC Symbol;Acc:29306]

Location
Gene

This transcript is a product of gene ENSG00000012822

This gene has 22 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
CALCOCO1-006ENST000004301172706ENSP00000397189606Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS44908YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CALCOCO1-001ENST000005508042291ENSP00000449960691Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS8864YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CALCOCO1-003ENST000005482633888ENSP00000447647633Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CALCOCO1-004ENST000002620593264ENSP00000262059690Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CALCOCO1-011ENST000005464431523ENSP00000456437232Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'--
CALCOCO1-017ENST00000549784746ENSP00000447117149Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-015ENST00000549349586ENSP00000450012115Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-016ENST00000548177567ENSP00000446820134Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-028ENST00000551900559ENSP00000450083164Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-030ENST00000549173554ENSP00000449058161Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-025ENST00000552623551ENSP00000448026120Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-024ENST00000549688549ENSP00000449796105Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-027ENST00000546619549ENSP00000448621160Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
CALCOCO1-019ENST00000547885555No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
CALCOCO1-021ENST00000547949532No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
CALCOCO1-007ENST000005499352112No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CALCOCO1-005ENST000005479881277No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CALCOCO1-013ENST00000549613884No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CALCOCO1-018ENST00000546774733No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CALCOCO1-020ENST00000548431612No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CALCOCO1-022ENST00000552282569No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
CALCOCO1-026ENST00000553154566No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 3 Coding exons: 0 Transcript length: 612 bps

Ensembl version

ENST00000548431.1

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000407427 (version 1)

Transcript-based displays