Description

calcium binding and coiled-coil domain 1 [Source:HGNC Symbol;Acc:HGNC:29306]

Synonyms

calphoglin, Cocoa, KIAA1536

Location
Gene

This transcript is a product of gene ENSG00000012822

This gene has 22 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
CALCOCO1-006ENST000004301172706 bp606 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44908Q9P1Z2 NM_001143682
NP_001137154
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CALCOCO1-001ENST000005508042291 bp691 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8864F8VPN1 F8VQE3 F8VRQ9
F8VUB3 F8VWP8 F8VZI3
F8W0X2 Q9P1Z2
NM_020898
NP_065949
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CALCOCO1-004ENST000002620595866 bp690 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VQE3 F8VRQ9
F8VUB3 F8VWP8 F8VZI3
F8W0X2 Q9P1Z2
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CALCOCO1-003ENST000005482633888 bp633 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VQE3 F8VRQ9
F8VUB3 F8VWP8 F8VZI3
F8W0X2 Q9P1Z2
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CALCOCO1-011ENST000005464431523 bp232 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
CALCOCO1-017ENST00000549784746 bp149 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VUB3 F8VWP8
F8VZI3 F8W0X2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-015ENST00000549349586 bp115 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VWP8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-016ENST00000548177567 bp134 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VUB3 F8VWP8
F8VZI3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-028ENST00000551900559 bp164 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VQE3 F8VRQ9
F8VUB3 F8VWP8 F8VZI3
F8W0X2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-030ENST00000549173554 bp161 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VXS2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-025ENST00000552623551 bp120 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VUB3 F8VWP8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-024ENST00000549688549 bp105 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VWP8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-027ENST00000546619549 bp160 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VPN1 F8VRQ9 F8VUB3
F8VWP8 F8VZI3 F8W0X2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
CALCOCO1-019ENST00000547885555 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
CALCOCO1-021ENST00000547949532 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
CALCOCO1-007ENST000005499352112 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
CALCOCO1-005ENST000005479881277 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
CALCOCO1-013ENST00000549613884 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
CALCOCO1-018ENST00000546774733 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
CALCOCO1-020ENST00000548431612 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
CALCOCO1-022ENST00000552282569 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
CALCOCO1-026ENST00000553154566 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 6 Coding exons: 3 Transcript length: 586 bps Translation length: 115 residues

Ensembl version

ENST00000549349.2

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays