Description

breast cancer 1, early onset [Source:HGNC Symbol;Acc:1100]

Location
Gene

This transcript is a product of gene ENSG00000012048

This gene has 31 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
BRCA1-001ENST000003576547094ENSP000003502831863Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11453YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-005ENST000004711815936ENSP000004189601884Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11456YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-006ENST000004937955732ENSP000004187751816Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11459YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-007ENST000004683003273ENSP00000417148699Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11455YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-014ENST000004917472379ENSP00000420705759Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11454YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-201ENST000003094867114ENSP000003109381567Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-202ENST000003463156451ENSP000002469071624Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-205ENST000003540716411ENSP000003260021598Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-204ENST000003529933780ENSP00000312236721Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-203ENST000003516663444ENSP00000338007680Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-011ENST000004700262108ENSP00000419274649Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-004ENST000004771521980ENSP00000419988622Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-009ENST000004785311972ENSP00000420412623Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-008ENST000004939191948ENSP00000418819572Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-013ENST000004941231612ENSP00000419103473Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-015ENST000004840871495ENSP00000419481498Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-024ENST000005915341282ENSP00000467329354Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-018ENST00000473961958ENSP00000420201319Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-019ENST00000487825800ENSP00000418212266Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-023ENST00000586385781ENSP00000465818173Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-003ENST00000497488779ENSP00000418986177Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-017ENST00000476777769ENSP00000417554222Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-022ENST00000461574726ENSP00000417241242Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'--
BRCA1-025ENST00000591849563ENSP0000046534796Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
BRCA1-016ENST00000489037455ENSP0000042078198Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
BRCA1-026ENST000004120611312ENSP00000397145437Non stop decay5'--
BRCA1-010ENST000004612215693ENSP0000041854863Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BRCA1-002ENST000004928591584ENSP0000042025359Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BRCA1-020ENST00000461798582ENSP0000041798863Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
BRCA1-012ENST000004672744497No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
BRCA1-021ENST00000472490561No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 22 Coding exons: 21 Transcript length: 3,273 bps Translation length: 699 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11455

Ensembl version

ENST00000468300.1

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000348804 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays