Description

paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]

Synonyms

AN, AN2, D11S812E, WAGR

Location
About this transcript

This transcript has 13 exons, is annotated with 25 domains and features, is associated with 415 variations and maps to 34 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PAX6-201ENST000004190226922436aaENSP00000404100
 
Protein coding
CCDS31452F1T0F8 P26367 NM_001258462
NP_001245391
TSL:1GENCODE basicAPPRIS P4
PAX6-202ENST000006063776860436aaENSP00000480026
 
Protein coding
CCDS31452F1T0F8 P26367 NM_001258463
NP_001245392
TSL:1GENCODE basicAPPRIS P4
PAX6-009ENST000003791292616436aaENSP00000368424
 
Protein coding
CCDS31452F1T0F8 P26367 -TSL:5GENCODE basicAPPRIS P4
PAX6-011ENST000003791072591436aaENSP00000368401
 
Protein coding
CCDS31452F1T0F8 P26367 -TSL:5GENCODE basicAPPRIS P4
PAX6-008ENST000003791322574422aaENSP00000368427
 
Protein coding
CCDS31451P26367 Q66SS1 NM_001127612
NP_001121084
TSL:5GENCODE basicAPPRIS ALT1
PAX6-003ENST000003791232160422aaENSP00000368418
 
Protein coding
CCDS31451P26367 Q66SS1 NM_000280
NM_001258464
NP_000271
NP_001245393
TSL:1GENCODE basicAPPRIS ALT1
PAX6-001ENST000003791151763436aaENSP00000368410
 
Protein coding
CCDS31452F1T0F8 P26367 NM_001604
NP_001595
TSL:1GENCODE basicAPPRIS P4
PAX6-002ENST000002410011631422aaENSP00000241001
 
Protein coding
CCDS31451P26367 Q66SS1 -TSL:1GENCODE basicAPPRIS ALT1
PAX6-005ENST000003791111627422aaENSP00000368406
 
Protein coding
CCDS31451P26367 Q66SS1 NM_001258465
NP_001245394
TSL:1GENCODE basicAPPRIS ALT1
PAX6-004ENST000003791092157422aaENSP00000368403
 
Protein coding
-P26367 Q66SS1 -CDS 3' incompleteTSL:2
PAX6-020ENST000005255356772aaENSP00000436365
 
Protein coding
---CDS 3' incompleteTSL:3
PAX6-021ENST0000052485357458aaENSP00000431585
 
Protein coding
-E9PKM0 -CDS 3' incompleteTSL:4
PAX6-012ENST0000042382256762aaENSP00000388132
 
Protein coding
-B1B1I9 -CDS 3' incompleteTSL:3
PAX6-016ENST00000455099497124aaENSP00000397384
 
Protein coding
-B1B1J0 -CDS 3' incompleteTSL:5
PAX6-013ENST0000043868145539aaENSP00000404356
 
Protein coding
-B1B1I8 -CDS 3' incompleteTSL:2
PAX6-029ENST00000533156847No protein-
 
Processed transcript
---TSL:5
PAX6-014ENST00000471303782No protein-
 
Processed transcript
---TSL:5
PAX6-027ENST00000531910643No protein-
 
Processed transcript
---TSL:3
PAX6-015ENST00000481563613No protein-
 
Processed transcript
---TSL:3
PAX6-028ENST00000530373572No protein-
 
Processed transcript
---TSL:4
PAX6-025ENST00000530714567No protein-
 
Processed transcript
---TSL:4
PAX6-024ENST00000534353540No protein-
 
Processed transcript
---TSL:4
PAX6-019ENST000005333336173No protein-
 
Retained intron
---TSL:2
PAX6-006ENST000004700272842No protein-
 
Retained intron
---TSL:2
PAX6-007ENST000004943772460No protein-
 
Retained intron
---TSL:2
PAX6-010ENST00000464174979No protein-
 
Retained intron
---TSL:5
PAX6-017ENST00000474783702No protein-
 
Retained intron
---TSL:2
PAX6-030ENST00000532916627No protein-
 
Retained intron
---TSL:3
PAX6-026ENST00000534390578No protein-
 
Retained intron
---TSL:4
PAX6-023ENST00000532175524No protein-
 
Retained intron
---TSL:3
PAX6-022ENST00000527769487No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 13 Coding exons: 10 Transcript length: 2,160 bps Translation length: 422 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS31451

Uniprot

This transcript corresponds to the following Uniprot identifiers: P26367

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000379123.9

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays