Description

Usher syndrome 1C (autosomal recessive, severe) [Source:HGNC Symbol;Acc:12597]

Location
Gene

This transcript is a product of gene ENSG00000006611

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
USH1C-006ENST000000052262700ENSP00000005226899Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS7825YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
USH1C-001ENST000003180242237ENSP00000317018552Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS31438YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
USH1C-005ENST000005277202278ENSP00000432944521Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
USH1C-003ENST000005270202159ENSP00000436934533Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
USH1C-008ENST000005261811040ENSP00000437128318Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
USH1C-002ENST000005263132149ENSP00000432236403Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
USH1C-009ENST00000529563942No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
USH1C-011ENST00000530700403No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
USH1C-010ENST00000527551371No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
USH1C-012ENST00000534556244No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 12 Coding exons: 12 Transcript length: 1,040 bps Translation length: 318 residues

Ensembl version

ENST00000526181.1

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000389156 (version 1)

Transcript-based displays