Description

spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]

Synonyms

FLJ21347, SSP411, Tisp78

Location
Gene

This transcript is a product of gene ENSG00000006282

This gene has 27 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SPATA20-202ENST000006196222769 bp742 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58564-NM_001258373
NP_001245302
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SPATA20-001ENST000000066582719 bp802 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11571Q8TB22 NM_022827
NP_073738
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SPATA20-004ENST000003564882634 bp786 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58563Q8TB22 NM_001258372
NP_001245301
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SPATA20-201ENST000003932442596 bp799 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8TB22 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SPATA20-002ENST000005043343539 bp43 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6R947 -
SPATA20-003ENST000005031272734 bp43 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6R947 -
SPATA20-005ENST000005055591590 bp43 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6R947 -
SPATA20-020ENST000005113471035 bp247 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SPATA20-010ENST00000502911879 bp56 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RC70 -
SPATA20-014ENST00000505456878 bp43 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6R947 -
SPATA20-009ENST00000505085628 bp67 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RIU6 -
SPATA20-024ENST00000508528512 bp110 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SPATA20-011ENST00000510917453 bp43 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6R947 -
SPATA20-006ENST000005119372669 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SPATA20-008ENST000005030633232 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-007ENST000005121811456 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-021ENST00000505656975 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-022ENST00000504265877 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-019ENST00000512416845 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-023ENST00000515619818 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-012ENST00000504271806 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-025ENST00000513618629 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-015ENST00000508598570 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-013ENST00000511605559 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-017ENST00000511845554 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-018ENST00000505336534 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SPATA20-016ENST00000515526498 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 2 Coding exons: 0 Transcript length: 559 bps

Ensembl version

ENST00000511605.1

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays