Description

spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]

Synonyms

FLJ21347, SSP411, Tisp78

Location
About this transcript

This transcript has 16 exons, is annotated with 13 domains and features, is associated with 293 variations and maps to 40 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SPATA20-201ENST000006196222769742aaENSP00000483295
 
Protein coding
CCDS58564Q8TB22 NM_001258373
NP_001245302
TSL:5GENCODE basicAPPRIS ALT1
SPATA20-001ENST000000066582719802aaENSP00000006658
 
Protein coding
CCDS11571Q8TB22 NM_022827
NP_073738
TSL:1GENCODE basicAPPRIS P3
SPATA20-004ENST000003564882634786aaENSP00000348878
 
Protein coding
CCDS58563Q8TB22 NM_001258372
NP_001245301
TSL:1GENCODE basicAPPRIS ALT2
SPATA20-002ENST00000504334353943aaENSP00000424215
 
Nonsense mediated decay
-D6R947 -TSL:2
SPATA20-003ENST00000503127273443aaENSP00000426228
 
Nonsense mediated decay
-D6R947 -TSL:1
SPATA20-005ENST00000505559159043aaENSP00000426025
 
Nonsense mediated decay
-D6R947 -TSL:2
SPATA20-020ENST000005113471035247aaENSP00000424538
 
Nonsense mediated decay
-H0Y9M1 -CDS 5' incompleteTSL:5
SPATA20-010ENST0000050291187956aaENSP00000422378
 
Nonsense mediated decay
-D6RC70 -TSL:5
SPATA20-014ENST0000050545687843aaENSP00000426608
 
Nonsense mediated decay
-D6R947 -TSL:5
SPATA20-009ENST0000050508562867aaENSP00000427374
 
Nonsense mediated decay
-D6RIU6 -TSL:4
SPATA20-024ENST00000508528512110aaENSP00000425271
 
Nonsense mediated decay
-H0Y9W3 -CDS 5' incompleteTSL:5
SPATA20-011ENST0000051091745343aaENSP00000423643
 
Nonsense mediated decay
-D6R947 -TSL:3
SPATA20-006ENST000005119372669No protein-
 
Processed transcript
---TSL:1
SPATA20-008ENST000005030633232No protein-
 
Retained intron
---TSL:2
SPATA20-007ENST000005121811456No protein-
 
Retained intron
---TSL:2
SPATA20-021ENST00000505656975No protein-
 
Retained intron
---TSL:5
SPATA20-022ENST00000504265877No protein-
 
Retained intron
---TSL:2
SPATA20-019ENST00000512416845No protein-
 
Retained intron
---TSL:3
SPATA20-023ENST00000515619818No protein-
 
Retained intron
---TSL:5
SPATA20-012ENST00000504271806No protein-
 
Retained intron
---TSL:2
SPATA20-025ENST00000513618629No protein-
 
Retained intron
---TSL:2
SPATA20-015ENST00000508598570No protein-
 
Retained intron
---TSL:4
SPATA20-013ENST00000511605559No protein-
 
Retained intron
---TSL:4
SPATA20-017ENST00000511845554No protein-
 
Retained intron
---TSL:4
SPATA20-018ENST00000505336534No protein-
 
Retained intron
---TSL:4
SPATA20-016ENST00000515526498No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 16 Coding exons: 16 Transcript length: 2,634 bps Translation length: 786 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58563

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TB22

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000356488.8

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays