Transcript: ENST00000506982.1 GUSBP5-205

Description

GUSB pseudogene 5 [Source:NCBI gene (formerly Entrezgene);Acc:441046]

Gene Synonyms

GYPELOC441046

Location

Chromosome 4: 143,953,635-144,126,359 forward strand.

About this transcript

This transcript has 5 exons and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSG00000251600.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000641328.2	GUSBP5-212	2724	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000641428.1	GUSBP5-213	5037	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000651102.1	GUSBP5-218	2948	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793859.1	GUSBP5-229	2367	No protein	-	lncRNA	-	-
ENST00000514475.2	GUSBP5-211	2275	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000793862.1	GUSBP5-232	2222	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510805.1	GUSBP5-209	1989	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000793893.1	GUSBP5-263	1915	No protein	-	lncRNA	-	-
ENST00000641741.2	GUSBP5-216	1820	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793894.1	GUSBP5-264	1816	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000642059.1	GUSBP5-217	1811	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793880.1	GUSBP5-250	1735	No protein	-	lncRNA	-	-
ENST00000641676.2	GUSBP5-215	1703	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793866.1	GUSBP5-236	1512	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793884.1	GUSBP5-254	1510	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653310.1	GUSBP5-219	1407	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793868.1	GUSBP5-238	1404	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793865.1	GUSBP5-235	1323	No protein	-	lncRNA	-	-
ENST00000793870.1	GUSBP5-240	1313	No protein	-	lncRNA	-	-
ENST00000396724.4	GUSBP5-202	1309	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000509873.5	GUSBP5-207	1303	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000641556.1	GUSBP5-214	1292	No protein	-	lncRNA	-	-
ENST00000793882.1	GUSBP5-252	1262	No protein	-	lncRNA	-	-
ENST00000793860.1	GUSBP5-230	1252	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658551.1	GUSBP5-221	1227	No protein	-	lncRNA	-	-
ENST00000793864.1	GUSBP5-234	1171	No protein	-	lncRNA	-	-
ENST00000793881.1	GUSBP5-251	1166	No protein	-	lncRNA	-	-
ENST00000793889.1	GUSBP5-259	1149	No protein	-	lncRNA	-	-
ENST00000793869.1	GUSBP5-239	1140	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000659540.1	GUSBP5-222	1138	No protein	-	lncRNA	-	-
ENST00000793867.1	GUSBP5-237	1137	No protein	-	lncRNA	-	-
ENST00000793861.1	GUSBP5-231	1134	No protein	-	lncRNA	-	-
ENST00000793895.1	GUSBP5-265	1123	No protein	-	lncRNA	-	-
ENST00000793863.1	GUSBP5-233	1111	No protein	-	lncRNA	-	-
ENST00000793888.1	GUSBP5-258	1078	No protein	-	lncRNA	-	-
ENST00000669148.1	GUSBP5-224	1071	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793857.1	GUSBP5-227	985	No protein	-	lncRNA	-	-
ENST00000793892.1	GUSBP5-262	967	No protein	-	lncRNA	-	-
ENST00000509369.2	GUSBP5-206	947	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000793858.1	GUSBP5-228	943	No protein	-	lncRNA	-	-
ENST00000793901.1	GUSBP5-271	924	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000793885.1	GUSBP5-255	913	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664496.1	GUSBP5-223	905	No protein	-	lncRNA	-	-
ENST00000793897.1	GUSBP5-267	881	No protein	-	lncRNA	-	-
ENST00000793899.1	GUSBP5-269	875	No protein	-	lncRNA	-	-
ENST00000793896.1	GUSBP5-266	841	No protein	-	lncRNA	-	-
ENST00000793871.1	GUSBP5-241	840	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000506982.1	GUSBP5-205	832	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000793878.1	GUSBP5-248	811	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000505000.1	GUSBP5-204	796	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000793875.1	GUSBP5-245	792	No protein	-	lncRNA	-	-
ENST00000793879.1	GUSBP5-249	773	No protein	-	lncRNA	-	-
ENST00000793886.1	GUSBP5-256	716	No protein	-	lncRNA	-	-
ENST00000793876.1	GUSBP5-246	715	No protein	-	lncRNA	-	-
ENST00000793900.1	GUSBP5-270	684	No protein	-	lncRNA	-	-
ENST00000793872.1	GUSBP5-242	682	No protein	-	lncRNA	-	-
ENST00000793877.1	GUSBP5-247	664	No protein	-	lncRNA	-	-
ENST00000793898.1	GUSBP5-268	650	No protein	-	lncRNA	-	-
ENST00000656620.1	GUSBP5-220	615	No protein	-	lncRNA	-	-
ENST00000671307.2	GUSBP5-225	581	No protein	-	lncRNA	-	-
ENST00000793873.1	GUSBP5-243	579	No protein	-	lncRNA	-	-
ENST00000793874.1	GUSBP5-244	570	No protein	-	lncRNA	-	-
ENST00000499587.2	GUSBP5-203	566	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000793890.1	GUSBP5-260	552	No protein	-	lncRNA	-	-
ENST00000793887.1	GUSBP5-257	540	No protein	-	lncRNA	-	-
ENST00000782645.1	GUSBP5-226	483	No protein	-	lncRNA	-	-
ENST00000847257.1	GUSBP5-276	449	No protein	-	lncRNA	-	-
ENST00000847256.1	GUSBP5-275	442	No protein	-	lncRNA	-	-
ENST00000510536.5	GUSBP5-208	410	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000793902.1	GUSBP5-272	394	No protein	-	lncRNA	-	-
ENST00000793891.1	GUSBP5-261	381	No protein	-	lncRNA	-	-
ENST00000793883.1	GUSBP5-253	369	No protein	-	lncRNA	-	-
ENST00000793903.1	GUSBP5-273	357	No protein	-	lncRNA	-	-
ENST00000793904.1	GUSBP5-274	350	No protein	-	lncRNA	-	-
ENST00000511042.5	GUSBP5-210	342	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 832 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000506982.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

dotter confirmed [Definitions]

non canonical TEC

QC splicing correct

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000506982.1 GUSBP5-205

Summary

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Transcript: ENST00000506982.1 GUSBP5-205

Summary

About Us

Get help

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