Transcript: ENST00000456240.1

Description

novel transcript

Location

Chromosome 1: 213,731,416-213,794,587 forward strand.

About this transcript

This transcript has 2 exons and maps to 122 oligo probes.

Gene

This transcript is a product of gene ENSG00000225233.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000788945.1	-	2095	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788946.1	-	1676	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788956.1	-	1604	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788953.1	-	1597	No protein	-	lncRNA	-	-
ENST00000788947.1	-	1503	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788955.1	-	1466	No protein	-	lncRNA	-	-
ENST00000788954.1	-	1391	No protein	-	lncRNA	-	-
ENST00000788971.1	-	1389	No protein	-	lncRNA	-	-
ENST00000788979.1	-	1302	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788961.1	-	1275	No protein	-	lncRNA	-	-
ENST00000788972.1	-	1242	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788949.1	-	1239	No protein	-	lncRNA	-	-
ENST00000788951.1	-	1219	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788967.1	-	1193	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788962.1	-	1150	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788959.1	-	1124	No protein	-	lncRNA	-	-
ENST00000788960.1	-	1105	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788976.1	-	1087	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788969.1	-	1063	No protein	-	lncRNA	-	-
ENST00000788950.1	-	1023	No protein	-	lncRNA	-	-
ENST00000788973.1	-	1006	No protein	-	lncRNA	-	-
ENST00000788993.1	-	989	No protein	-	lncRNA	-	-
ENST00000788986.1	-	979	No protein	-	lncRNA	-	-
ENST00000788952.1	-	974	No protein	-	lncRNA	-	-
ENST00000788975.1	-	974	No protein	-	lncRNA	-	-
ENST00000788965.1	-	957	No protein	-	lncRNA	-	-
ENST00000417161.3	-	954	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000788974.1	-	948	No protein	-	lncRNA	-	-
ENST00000788968.1	-	947	No protein	-	lncRNA	-	-
ENST00000788989.1	-	939	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000788948.1	-	922	No protein	-	lncRNA	-	-
ENST00000788964.1	-	873	No protein	-	lncRNA	-	-
ENST00000788988.1	-	859	No protein	-	lncRNA	-	-
ENST00000788958.1	-	843	No protein	-	lncRNA	-	-
ENST00000788970.1	-	816	No protein	-	lncRNA	-	-
ENST00000788982.1	-	816	No protein	-	lncRNA	-	-
ENST00000788963.1	-	799	No protein	-	lncRNA	-	-
ENST00000788957.1	-	782	No protein	-	lncRNA	-	-
ENST00000788987.1	-	754	No protein	-	lncRNA	-	-
ENST00000788992.1	-	712	No protein	-	lncRNA	-	-
ENST00000788966.1	-	679	No protein	-	lncRNA	-	-
ENST00000788984.1	-	614	No protein	-	lncRNA	-	-
ENST00000788985.1	-	590	No protein	-	lncRNA	-	-
ENST00000788977.1	-	589	No protein	-	lncRNA	-	-
ENST00000788978.1	-	573	No protein	-	lncRNA	-	-
ENST00000788990.1	-	548	No protein	-	lncRNA	-	-
ENST00000788991.1	-	483	No protein	-	lncRNA	-	-
ENST00000788981.1	-	479	No protein	-	lncRNA	-	-
ENST00000788994.1	-	474	No protein	-	lncRNA	-	-
ENST00000788980.1	-	454	No protein	-	lncRNA	-	-
ENST00000788995.1	-	389	No protein	-	lncRNA	-	-
ENST00000788983.1	-	383	No protein	-	lncRNA	-	-
ENST00000456240.1	-	347	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 347 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000456240.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000456240.1

Summary

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Transcript: ENST00000456240.1

Summary

About Us

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