Transcript: ENST00000422353.6

Description

novel transcript

Location

Chromosome 2: 215,533,059-215,679,776 forward strand.

About this transcript

This transcript has 4 exons and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000237525.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000767353.1	-	1782	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422353.6	-	2121	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000417485.6	-	1642	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000767365.1	-	1579	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767354.1	-	1569	No protein	-	lncRNA	-	-
ENST00000767370.1	-	1553	No protein	-	lncRNA	-	-
ENST00000655359.1	-	1420	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767371.1	-	1408	No protein	-	lncRNA	-	-
ENST00000767366.1	-	1345	No protein	-	lncRNA	-	-
ENST00000662840.1	-	1226	No protein	-	lncRNA	-	-
ENST00000767361.1	-	1050	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767364.1	-	920	No protein	-	lncRNA	-	-
ENST00000767360.1	-	892	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767356.1	-	826	No protein	-	lncRNA	-	-
ENST00000767376.1	-	822	No protein	-	lncRNA	-	-
ENST00000767357.1	-	766	No protein	-	lncRNA	-	-
ENST00000767375.1	-	736	No protein	-	lncRNA	-	-
ENST00000767369.1	-	702	No protein	-	lncRNA	-	-
ENST00000767372.1	-	698	No protein	-	lncRNA	-	-
ENST00000767377.1	-	691	No protein	-	lncRNA	-	-
ENST00000767363.1	-	679	No protein	-	lncRNA	-	-
ENST00000767362.1	-	632	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000767374.1	-	614	No protein	-	lncRNA	-	-
ENST00000767368.1	-	605	No protein	-	lncRNA	-	-
ENST00000767355.1	-	604	No protein	-	lncRNA	-	-
ENST00000767359.1	-	593	No protein	-	lncRNA	-	-
ENST00000767358.1	-	558	No protein	-	lncRNA	-	-
ENST00000767367.1	-	539	No protein	-	lncRNA	-	-
ENST00000767373.1	-	515	No protein	-	lncRNA	-	-
ENST00000428487.1	-	508	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000767378.1	-	418	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,121 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000422353.6

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000422353.6

Summary

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Transcript: ENST00000422353.6

Summary

About Us

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