Human (GRCh38.p14)
Description

chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:24290]

Gene Synonyms

CHGN, CSGALNACT-1, FLJ11264

Location
About this transcript

This transcript has 10 exons, is annotated with 14 domains and features and maps to 574 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000692225.2CSGALNACT1-2173701532aaENSP00000509853.1
 
Protein coding
CCDS6010Q8TDX6-1 NM_001354483.2MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000950556.1CSGALNACT1-2864563532aaENSP00000620615.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950537.1CSGALNACT1-2674507532aaENSP00000620596.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950538.1CSGALNACT1-2684416532aaENSP00000620597.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950530.1CSGALNACT1-2604413532aaENSP00000620589.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950539.1CSGALNACT1-2694310532aaENSP00000620598.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000695893.1CSGALNACT1-2194279532aaENSP00000512243.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1
ENST00000950531.1CSGALNACT1-2614278532aaENSP00000620590.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950558.1CSGALNACT1-2884277532aaENSP00000620617.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950557.1CSGALNACT1-2874260532aaENSP00000620616.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950535.1CSGALNACT1-2654246532aaENSP00000620594.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950532.1CSGALNACT1-2624239532aaENSP00000620591.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000454498.6CSGALNACT1-2034232532aaENSP00000411816.2
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1TSL:1
ENST00000950536.1CSGALNACT1-2664195532aaENSP00000620595.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000695895.1CSGALNACT1-2214124532aaENSP00000512245.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1
ENST00000695898.1CSGALNACT1-2244117532aaENSP00000512248.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE PrimaryGENCODE BasicAPPRIS P1
ENST00000950543.1CSGALNACT1-2734047532aaENSP00000620602.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950533.1CSGALNACT1-2634028532aaENSP00000620592.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950534.1CSGALNACT1-2644017532aaENSP00000620593.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950521.1CSGALNACT1-2514015532aaENSP00000620580.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950560.1CSGALNACT1-2904002532aaENSP00000620619.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950526.1CSGALNACT1-2564001532aaENSP00000620585.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895856.1CSGALNACT1-2293985532aaENSP00000565915.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950549.1CSGALNACT1-2793979532aaENSP00000620608.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950542.1CSGALNACT1-2723971532aaENSP00000620601.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895855.1CSGALNACT1-2283964532aaENSP00000565914.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895858.1CSGALNACT1-2313957532aaENSP00000565917.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950553.1CSGALNACT1-2833948532aaENSP00000620612.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950552.1CSGALNACT1-2823945532aaENSP00000620611.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950548.1CSGALNACT1-2783943532aaENSP00000620607.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950523.1CSGALNACT1-2533940532aaENSP00000620582.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950559.1CSGALNACT1-2893936532aaENSP00000620618.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950522.1CSGALNACT1-2523930532aaENSP00000620581.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950545.1CSGALNACT1-2753926532aaENSP00000620604.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950561.1CSGALNACT1-2913905532aaENSP00000620620.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950544.1CSGALNACT1-2743895532aaENSP00000620603.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950518.1CSGALNACT1-2483890532aaENSP00000620577.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000695892.1CSGALNACT1-2183887532aaENSP00000512242.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1
ENST00000950525.1CSGALNACT1-2553885532aaENSP00000620584.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895857.1CSGALNACT1-2303879532aaENSP00000565916.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950517.1CSGALNACT1-2473875532aaENSP00000620576.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000332246.10CSGALNACT1-2013872532aaENSP00000330805.6
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1TSL:1
ENST00000950520.1CSGALNACT1-2503870532aaENSP00000620579.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950529.1CSGALNACT1-2593870532aaENSP00000620588.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950524.1CSGALNACT1-2543865532aaENSP00000620583.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950546.1CSGALNACT1-2763859532aaENSP00000620605.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895864.1CSGALNACT1-2373855532aaENSP00000565923.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950554.1CSGALNACT1-2843854532aaENSP00000620613.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000695894.1CSGALNACT1-2203843532aaENSP00000512244.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1
ENST00000950515.1CSGALNACT1-2453831532aaENSP00000620574.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950514.1CSGALNACT1-2443827532aaENSP00000620573.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950519.1CSGALNACT1-2493824532aaENSP00000620578.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895854.1CSGALNACT1-2273821532aaENSP00000565913.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950547.1CSGALNACT1-2773821532aaENSP00000620606.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000695896.1CSGALNACT1-2223808532aaENSP00000512246.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1
ENST00000950516.1CSGALNACT1-2463803532aaENSP00000620575.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950550.1CSGALNACT1-2803801532aaENSP00000620609.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950513.1CSGALNACT1-2433799532aaENSP00000620572.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895865.1CSGALNACT1-2383789532aaENSP00000565924.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895868.1CSGALNACT1-2413784532aaENSP00000565927.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000695897.1CSGALNACT1-2233755532aaENSP00000512247.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1
ENST00000950562.1CSGALNACT1-2923642532aaENSP00000620621.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950551.1CSGALNACT1-2813608532aaENSP00000620610.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895866.1CSGALNACT1-2393518532aaENSP00000565925.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895867.1CSGALNACT1-2402909532aaENSP00000565926.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895860.1CSGALNACT1-2332859532aaENSP00000565919.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895863.1CSGALNACT1-2362829532aaENSP00000565922.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895862.1CSGALNACT1-2352780532aaENSP00000565921.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950540.1CSGALNACT1-2702746532aaENSP00000620599.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895861.1CSGALNACT1-2342742532aaENSP00000565920.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950528.1CSGALNACT1-2582714532aaENSP00000620587.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895859.1CSGALNACT1-2322703532aaENSP00000565918.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950527.1CSGALNACT1-2572698532aaENSP00000620586.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950555.1CSGALNACT1-2852656532aaENSP00000620614.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000895869.1CSGALNACT1-2422640532aaENSP00000565928.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000950541.1CSGALNACT1-2712383532aaENSP00000620600.1
 
Protein coding
CCDS6010--GENCODE BasicAPPRIS P1
ENST00000522854.5CSGALNACT1-2111990532aaENSP00000429809.1
 
Protein coding
CCDS6010Q8TDX6-1 -GENCODE BasicAPPRIS P1TSL:1
ENST00000523262.5CSGALNACT1-213792104aaENSP00000428089.1
 
Protein coding
E5RK93 -TSL:2CDS 3' incomplete
ENST00000517494.1CSGALNACT1-20476696aaENSP00000429130.1
 
Protein coding
E5RJB6 -TSL:3CDS 3' incomplete
ENST00000520003.5CSGALNACT1-20864653aaENSP00000428774.1
 
Protein coding
E5RGB2 -TSL:4CDS 3' incomplete
ENST00000524213.5CSGALNACT1-21655414aaENSP00000427740.1
 
Protein coding
E5RGK2 -TSL:2CDS 3' incomplete
ENST00000695899.1CSGALNACT1-2255043297aaENSP00000512249.1
 
Nonsense mediated decay
Q8TDX6-3 --
ENST00000397998.7CSGALNACT1-2023962297aaENSP00000381084.3
 
Nonsense mediated decay
Q8TDX6-3 -TSL:2
ENST00000695900.1CSGALNACT1-2263815319aaENSP00000512250.1
 
Nonsense mediated decay
A0A8Q3WKU9 --
ENST00000519222.5CSGALNACT1-2072352297aaENSP00000428216.1
 
Nonsense mediated decay
Q8TDX6-3 -TSL:2
ENST00000518542.1CSGALNACT1-206895No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000523227.5CSGALNACT1-212633No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000517651.5CSGALNACT1-205582No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000523919.5CSGALNACT1-214577No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000524112.1CSGALNACT1-215478No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000522573.5CSGALNACT1-209405No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000522732.1CSGALNACT1-210296No protein-
 
Protein coding CDS not defined
--TSL:4
Statistics

Exons: 10, Coding exons: 7, Transcript length: 3,872 bps, Translation length: 532 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDX6

CCDS

This transcript is a member of the Human CCDS set: CCDS6010

Transcript Support Level (TSL)

TSL:1

Version

ENST00000332246.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.