Description

transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11634]

Synonyms

bHLHb19, E2-2, ITF2, SEF2-1B

Location
Gene

This transcript is a product of gene ENSG00000196628

This gene has 48 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
TCF4-201ENST000003544528332671 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42438A0A075B723 G0LNT3 G0LNT4
G0LNT7 G0LNT8 H3BMC8
H3BME8 H3BNI2 H3BNZ2
H3BP59 H3BPG3 H3BRF7
H3BSP7 H3BT24 H3BTC3
H3BTM9 H3BUQ3 P15884
NM_001083962
NP_001077431
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
TCF4-002ENST000003560738317667 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11960A0A024R2C0 A0A075B723 G0LNT3
G0LNT4 G0LNT7 G0LNT8
H3BMC8 H3BME8 H3BNI2
H3BNZ2 H3BP59 H3BPG3
H3BRF7 H3BSP7 H3BT24
H3BTC3 H3BTM9 H3BUQ3
P15884
NM_003199
NP_003190
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
TCF4-003ENST000005375782745647 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58629A0A075B723 G0LNT3 G0LNT7
G0LNT8 H3BMC8 H3BME8
H3BNI2 H3BNZ2 H3BP59
H3BPG3 H3BRF7 H3BSP7
H3BT24 H3BTC3 H3BTM9
H3BUQ3 P15884
NM_001243227
NP_001230156
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-019ENST000005644032660677 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58630G0LNT3 G0LNT4 H3BMC8
H3BME8 H3BNI2 H3BP59
H3BRF7 H3BTC3 H3BTP3
H3BUQ3
NM_001243228
NP_001230157
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI2APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
TCF4-004ENST000003983392478773 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58631A0A075B723 G0LNT3 G0LNT4
G0LNT7 G0LNT8 H3BMC8
H3BME8 H3BNI2 H3BNZ2
H3BP59 H3BPG3 H3BRF7
H3BSP7 H3BT24 H3BTC3
H3BTM9 H3BUQ3
NM_001243226
NP_001230155
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-015ENST000004574822438511 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58624P15884 NM_001243234
NP_001230163
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
TCF4-001ENST000005650182411671 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42438A0A075B723 G0LNT3 G0LNT4
G0LNT7 G0LNT8 H3BMC8
H3BME8 H3BNI2 H3BNZ2
H3BP59 H3BPG3 H3BRF7
H3BSP7 H3BT24 H3BTC3
H3BTM9 H3BUQ3 P15884
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
TCF4-008ENST000005686732403647 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58629A0A075B723 G0LNT3 G0LNT7
G0LNT8 H3BMC8 H3BME8
H3BNI2 H3BNZ2 H3BP59
H3BPG3 H3BRF7 H3BSP7
H3BT24 H3BTC3 H3BTM9
H3BUQ3 P15884
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-006ENST000005649992401667 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11960A0A024R2C0 A0A075B723 G0LNT3
G0LNT4 G0LNT7 G0LNT8
H3BMC8 H3BME8 H3BNI2
H3BNZ2 H3BP59 H3BPG3
H3BRF7 H3BSP7 H3BT24
H3BTC3 H3BTM9 H3BUQ3
P15884
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
TCF4-009ENST000005430822396625 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58628G0LNT7 G0LNT8 H3BNI2
H3BNZ2 H3BPG3 H3BRF7
H3BSP7 H3BTM9 P15884
NM_001243231
NP_001230160
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-011ENST000005442412264600 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58627G0LNT7 G0LNT8 H3BNZ2
H3BPG3 H3BRF7 H3BSP7
H3BTM9 P15884
NM_001243232
NP_001230161
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-010ENST000005619922184537 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58626G0LNT7 G0LNT8 H3BNZ2
H3BPG3 H3BRF7 H3BSP7
H3BTM9 P15884
NM_001243233
NP_001230162
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-041ENST000005662862119664 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59321A0A075B723 G0LNT3 G0LNT5
G0LNT7 G0LNT8 H3BMC8
H3BME8 H3BNI2 H3BNZ2
H3BP59 H3BPG3 H3BRF7
H3BSP7 H3BT24 H3BTC3
H3BTM9 H3BUQ3 P15884
NM_001243230
NP_001230159
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-013ENST000005378561929537 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58626G0LNT7 G0LNT8 H3BNZ2
H3BPG3 H3BRF7 H3BSP7
H3BTM9 P15884
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-044ENST000005702871896507 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58625P15884 NM_001243235
NP_001230164
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
TCF4-012ENST000005701771872537 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58626G0LNT7 G0LNT8 H3BNZ2
H3BPG3 H3BRF7 H3BSP7
H3BTM9 P15884
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-016ENST000005618311823507 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58623P15884 NM_001243236
NP_001230165
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-202ENST000006160538140583 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BME8 P15884
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-005ENST000005687402620642 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 G0LNT7 G0LNT8
H3BME8 H3BNZ2 H3BPG3
H3BPJ7 H3BRF7 H3BSP7
H3BTM9
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-007ENST000005409992572643 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A075B723 G0LNT3 G0LNT7
G0LNT8 H3BMC8 H3BME8
H3BNI2 H3BNZ2 H3BP59
H3BPG3 H3BRF7 H3BSP7
H3BT24 H3BTC3 H3BTM9
H3BUQ3 P15884
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-045ENST000005662792128611 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BME8 P15884
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-046ENST000005678801948607 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BME8 P15884
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-042ENST000005642281915596 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT7 G0LNT8 H3BNZ2
H3BPG3 H3BRF7 H3BSP7
H3BTM9 P15884
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TCF4-021ENST00000568169870280 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A075B723 G0LNT1 G0LNT3
G0LNT7 G0LNT8 H3BMC8
H3BME8 H3BNI2 H3BNZ2
H3BP59 H3BRF7 H3BSP7
H3BTC3 H3BTM9 H3BTZ0
H3BUQ3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-027ENST00000566514843265 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A075B723 G0LNT3 G0LNT7
G0LNT8 H3BMC8 H3BME8
H3BNI2 H3BNZ2 H3BP59
H3BRF7 H3BSP7 H3BT24
H3BTC3 H3BTM9 H3BUQ3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-024ENST00000565908752209 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A075B723 G0LNT3 H3BMC8
H3BME8 H3BNI2 H3BP59
H3BRF7 H3BTC3 H3BUQ3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-038ENST00000570146661166 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-033ENST00000568186632119 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT7 G0LNT8 H3BRF7
H3BSP7 H3BTM9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-029ENST0000056284759756 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BNI2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-035ENST00000562607594123 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT7 G0LNT8 H3BNZ2
H3BRF7 H3BSP7 H3BTM9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-032ENST00000566777588113 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT8 H3BRF7 H3BTM9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-025ENST00000563888581144 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BMC8 H3BME8
H3BNI2 H3BUQ3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-022ENST0000056935757899 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BME8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-023ENST00000564343568135 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BMC8 H3BME8
H3BNI2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-034ENST00000569012561163 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT7 G0LNT8 H3BNZ2
H3BPG3 H3BRF7 H3BSP7
H3BTM9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-028ENST00000563824557157 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BMC8 H3BME8
H3BNI2 H3BP59 H3BTC3
H3BUQ3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-026ENST00000568147550153 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 H3BMC8 H3BME8
H3BNI2 H3BP59 H3BUQ3
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-020ENST00000565124532160 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT2 G0LNT3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-014ENST0000056203051553 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BRF7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-040ENST00000562543492139 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT3 G0LNT4 H3BME8
H3BNI2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-047ENST0000059081045454 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BRF7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-043ENST00000562638401119 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT7 G0LNT8 H3BRF7
H3BSP7 H3BTM9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-039ENST00000565393314105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G0LNT2 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-037ENST00000563760851No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-036ENST00000566376463No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-030ENST00000565580298No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-017ENST000005636866019No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TCF4-018ENST000005626805354No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Transcript-based displays