Description

perforin 1 (pore forming protein) [Source:HGNC Symbol;Acc:HGNC:9360]

Synonyms

HPLH2, P1, PFP

Location
About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 438 variations and maps to 28 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PRF1-201ENST000004412592533555aaENSP00000398568
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7305P14222 NM_001083116
NM_005041
NP_001076585
NP_005032
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

PRF1-001ENST000003732092492555aaENSP00000362305
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7305P14222 -TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Transcript-based displays