Description

collagen, type VIII, alpha 2 [Source:HGNC Symbol;Acc:HGNC:2216]

Synonyms

FECD, FECD1, PPCD, PPCD2

Location
Gene

This transcript is a product of gene ENSG00000171812

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
COL8A2-003ENST000003977994670703 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS403E9PP49 P25067 Q4VAQ1
R9UH34
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
COL8A2-001ENST000003031434452703 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS403E9PP49 P25067 Q4VAQ1
R9UH34
NM_005202
NP_005193
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
COL8A2-002ENST000004817852036638 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS72756E9PP49 Q4VAQ1 NM_001294347
NP_001281276
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL8A2-201ENST000006159901353427 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q4VAQ0 Q4VAQ1 R9UH34
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Transcript-based displays