Description

POU class 5 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9221]

Synonyms

MGC22487, OCT3, Oct4, OTF3

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
POU5F1-001ENST000004330631420360 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B5B8N7 B5B8N8 B5B8N9
B5B8P0 B5B8P1 B5B8P2
B5B8P3 B5B8P4 B5B8P6
B5B8P7 B5B8P8 B5B8P9
B5B8Q0 B5B8Q1 B5B8Q2
B5B8Q4 D2IYK3 F2Z381
Q01860 U3KQH6
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU5F1-002ENST000004190951163265 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F2Z381 Q01860 U3KQH6
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU5F1-207ENST000005486821084186 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B5B8N7 B5B8N8 B5B8N9
B5B8P0 B5B8P1 B5B8P2
B5B8P3 B5B8P4 B5B8P6
B5B8P7 B5B8P8 B5B8P9
B5B8Q0 B5B8Q1 B5B8Q2
B5B8Q4
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU5F1-004ENST00000483880696No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

POU5F1-003ENST00000498800799No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000405041.2

Transcript-based displays