Description

Sp1 transcription factor [Source:HGNC Symbol;Acc:HGNC:11205]

Location
About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 182 variations and maps to 8 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SP1-002ENST000004264317603778aaENSP00000404263
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44898P08047 NM_003109
NP_003100
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
SP1-001ENST000003274432846785aaENSP00000329357
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8857P08047 NM_001251825
NM_138473
NP_001238754
NP_612482
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI3APPRIS candidate principal isoform (earliest CCDS)
Glossary entry for APPRIS
APPRIS website
SP1-004ENST000005485601061230aaENSP00000458133
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BVI2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SP1-003ENST00000551969602162aaENSP00000457804
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BUU5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000329357.4

Transcript-based displays