Description

NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]

Synonyms

CSX, CSX1, NKX2.5, NKX2E, NKX4-1

Gene

This transcript is a product of gene ENSG00000183072

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
NKX2-5-001ENST000003291981709324 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4387A1ECB8 P52952 NM_004387
NP_004378
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
NKX2-5-003ENST000004244061124112 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54950P52952 NM_001166175
NP_001159647
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NKX2-5-004ENST000005218481027151 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54949P52952 NM_001166176
NP_001159648
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
NKX2-5-002ENST00000517440655142 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E5RH49 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000327758.4

Transcript-based displays