Description

tsukushi, small leucine rich proteoglycan [Source:HGNC Symbol;Acc:HGNC:28850]

Synonyms

E2IG4, LRRC54, TSK

Location
Gene

This transcript is a product of gene ENSG00000182704

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
TSKU-004ENST000005278813554353 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8246A0A024R5J8 E9PLG7 E9PN12
Q8WUA8
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
TSKU-001ENST000003330902712353 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8246A0A024R5J8 E9PLG7 E9PN12
Q8WUA8
NM_015516
NP_056331
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
TSKU-201ENST000006129302666353 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8246A0A024R5J8 E9PLG7 E9PN12
Q8WUA8
NM_001258210
NP_001245139
TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
TSKU-002ENST00000533752643150 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PLG7 E9PN12 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TSKU-003ENST00000525167542105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PN12 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000332668.4

Transcript-based displays