Description

activating transcription factor 7 interacting protein [Source:HGNC Symbol;Acc:HGNC:20092]

Synonyms

FLJ10688, p621

Location
Gene

This transcript is a product of gene ENSG00000171681

This gene has 24 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
ATF7IP-201ENST0000026116888781270 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8663A0A024RAY1 A8MV73 F5GYR7
F5GZ10 F5GZ98 F5H1K9
F5H221 F5H2H9 F5H2W9
F5H3C4 F5H502 F5H6X8
F5H8I0 F8WE35 Q6VMQ6
NM_018179
NP_060649
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
ATF7IP-001ENST0000053644487741269 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS66327A8MV73 F5GYR7 F5GZ10
F5GZ98 F5H1K9 F5H221
F5H2H9 F5H2W9 F5H3C4
F5H502 F5H6X8 F5H8I0
F8WE35 Q6VMQ6
NM_001286514
NP_001273443
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
ATF7IP-004ENST0000054318948871105 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS73449A8MV73 F5GYR7 F5GZ10
F5GZ98 F5H1K9 F5H221
F5H2H9 F5H2W9 F5H3C4
F5H502 F5H6X8 F5H8I0
F8WE35 Q6VMQ6
NM_001286515
NP_001273444
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
ATF7IP-002ENST0000054462748471278 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS66326A0A024RAY1 A8MV73 F5GYR7
F5GZ10 F5GZ98 F5H1K9
F5H221 F5H2H9 F5H2W9
F5H3C4 F5H502 F5H6X8
F5H8I0 F8WE35 Q6VMQ6
NM_181352
NP_851997
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI2APPRIS candidate principal isoform (longest CCDS)
Glossary entry for APPRIS
APPRIS website
ATF7IP-024ENST0000054079341421270 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8663A0A024RAY1 A8MV73 F5GYR7
F5GZ10 F5GZ98 F5H1K9
F5H221 F5H2H9 F5H2W9
F5H3C4 F5H502 F5H6X8
F5H8I0 F8WE35 Q6VMQ6
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CIAPPRIS candidate principal isoform
Glossary entry for APPRIS
APPRIS website
ATF7IP-018ENST000003962791727515 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8MV73 F5GZ10 F5GZ98
F5H1K9 F5H221 F5H2H9
F5H2W9 F5H3C4 F5H502
F5H6X8 F5H8I0 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-008ENST00000535738619115 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-016ENST0000054250858032 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H3C4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-020ENST00000545723577143 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H3C4 F5H592
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-022ENST00000542514575132 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H221 F5H3C4
F5H6X8 F5H8I0 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-012ENST0000054299157459 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H3C4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-014ENST00000539057573177 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ10 F5GZ98 F5H1K9
F5H221 F5H2H9 F5H2W9
F5H3C4 F5H502 F5H6X8
F5H8I0 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-009ENST00000535132572103 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H221 F5H3C4
F5H6X8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-015ENST0000053627957189 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H3C4 F5H6X8
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-013ENST00000541056570169 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ10 F5GZ98 F5H221
F5H2H9 F5H2W9 F5H3C4
F5H6X8 F5H8I0 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-019ENST00000545769568169 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ10 F5GZ98 F5H221
F5H2H9 F5H2W9 F5H3C4
F5H6X8 F5H8I0 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-010ENST00000542967564176 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ10 F5GZ98 F5H1K9
F5H221 F5H2H9 F5H2W9
F5H3C4 F5H502 F5H6X8
F5H8I0 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-021ENST0000053851155896 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GYR7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-023ENST00000428217555125 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H221 F5H3C4
F5H6X8 F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-011ENST00000534828550152 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5GZ98 F5H221 F5H2W9
F5H3C4 F5H6X8 F5H8I0
F8WE35
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-027ENST000005416542688No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-026ENST000005396592298No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-003ENST000005376533563No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ATF7IP-007ENST00000535179746No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000261168.4

Transcript-based displays