Description

PDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]

Synonyms

CT84, FLJ14385, Nori-3, SPK, TOPK

Location
About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 40 variations and maps to 1 oligo probe.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PBK-001ENST000003019052118322aaENSP00000301905
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS6063Q96KB5 V9HWH0 NM_018492
NP_060962
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PBK-002ENST000005229441499333aaENSP00000428489
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS64858Q96KB5 NM_001278945
NP_001265874
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PBK-005ENST00000521226748151aaENSP00000427892
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E5RFX4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

PBK-006ENST0000052426681963aaENSP00000428438
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E5RIE1 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000427892.2

Transcript-based displays