Description

msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391]

Synonyms

HOX7, HYD1, OFC5

Location
About this transcript

This transcript has 2 exons, is annotated with 11 domains and features, is associated with 94 variations and maps to 15 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MSX1-001ENST000003827231939303aaENSP00000372170
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3378P28360 NM_002448
NP_002439
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
MSX1-002ENST00000468421509No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000372170.4

Transcript-based displays