Description

gap junction protein, beta 6, 30kDa [Source:HGNC Symbol;Acc:HGNC:4288]

Synonyms

CX30, DFNA3, ED2, EDH, HED

Location
About this transcript

This transcript has 4 exons, is annotated with 13 domains and features, is associated with 130 variations and maps to 22 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GJB6-004ENST000003561922131261aaENSP00000348521
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_001110219
NP_001103689
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GJB6-003ENST000004000661927261aaENSP00000382939
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_001110220
NP_001103690
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GJB6-001ENST000002411241808261aaENSP00000241124
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_006783
NP_006774
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

GJB6-002ENST000004000651805261aaENSP00000382938
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9291A0A024RDS4 O95452 NM_001110221
NP_001103691
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Protein domains for ENSP00000382939.3

Transcript-based displays