Description

msh homeobox 2 [Source:HGNC Symbol;Acc:HGNC:7392]

Synonyms

CRS2, FPP, HOX8, MSH, PFM, PFM1

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 26 variations and maps to 24 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
MSX2-001ENST000002392432241267aaENSP00000239243
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4392P35548 NM_002449
NP_002440
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

MSX2-002ENST000005077851188134aaENSP00000427425
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RIS4 -TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Protein domains for ENSP00000427425.1

Transcript-based displays