Description

epiphycan [Source:HGNC Symbol;Acc:HGNC:3053]

Synonyms

DSPG3, Pg-Lb, SLRR3B

Location
About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 110 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
EPYC-001ENST000002611721539322aaENSP00000261172
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS31870A0A024RBC3 Q99645 NM_004950
NP_004941
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
EPYC-002ENST00000551767790234aaENSP00000448272
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8VSI4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

EPYC-003ENST00000550203669No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000261172.3

Transcript-based displays