Description

tripartite motif containing 59 [Source:HGNC Symbol;Acc:HGNC:30834]

Synonyms

Mrf1, RNF104, TRIM57, TSBF1

Gene

This transcript is a product of gene ENSG00000213186

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
TRIM59-001ENST000003097843867403 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3190C9IZE0 C9J614 C9J9F0
C9JE08 Q8IWR1
NM_173084
NP_775107
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
TRIM59-201ENST000005434694615323 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZE0 C9J614 C9J9F0
C9JE08 F5GZP3
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRIM59-007ENST00000479460860177 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZE0 C9J614 C9J9F0
C9JE08
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TRIM59-006ENST00000496222603179 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IY67 C9IZE0 C9J9F0
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TRIM59-009ENST0000046854260168 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JNB9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TRIM59-008ENST00000494486577111 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J9F0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TRIM59-004ENST00000471155576114 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZE0 C9J9F0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

TRIM59-005ENST00000471396548155 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9IZE0 C9J9F0 C9JE08
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

TSL4:The best supporting EST for this transcript is flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000311219.4

Transcript-based displays