Description

Sad1 and UNC84 domain containing 5 [Source:HGNC Symbol;Acc:HGNC:16252]

Synonyms

dJ726C3.1, SPAG4L, TSARG4

Location
About this transcript

This transcript has 13 exons, is annotated with 3 domains and features, is associated with 163 variations and maps to 16 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SUN5-001ENST000003561731254379aaENSP00000348496
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13209Q8TC36 NM_080675
NP_542406
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI2APPRIS candidate principal isoform (CCDS)
Glossary entry for APPRIS
APPRIS website
SUN5-004ENST000003755231153354aaENSP00000364673
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A9Z1W8 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species
Glossary entry for APPRIS
APPRIS website
SUN5-002ENST00000420875528152aaENSP00000400089
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5TDX9 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SUN5-003ENST00000375519513122aaENSP00000364669
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5TDX8 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Protein domains for ENSP00000348496.3

Transcript-based displays