Description

hepatocyte nuclear factor 4, alpha [Source:HGNC Symbol;Acc:HGNC:5024]

Synonyms

HNF4, MODY, MODY1, NR2A1, TCF14

Location
Gene

This transcript is a product of gene ENSG00000101076

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
HNF4A-201ENST000006195504763449 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS74728B9VVT8 NR2A1-201 NM_001287182
NM_001287183
NP_001274111
NP_001274112
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HNF4A-002ENST000003160994694474 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13330F1D8T1 NR2A1-002 P41235
NM_000457
NM_001258355
NP_000448
NP_001245284
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
HNF4A-006ENST000004156912302464 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46605F1D8S2 NR2A1-006 P41235
NM_178849
NP_849180
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HNF4A-004ENST000004435981603417 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13331NR2A1-004 P41235 NM_178850
NP_849181
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HNF4A-001ENST000003166731470452 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42876F1D8T0 NR2A1-001 P41235
NM_175914
NP_787110
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HNF4A-005ENST000004572321339442 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46604NR2A1-005 P41235 NM_001030003
NP_001025174
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HNF4A-007ENST000006097951192395 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS68131NR2A1-007 P41235 NM_001030004
NM_001287184
NP_001025175
NP_001274113
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
HNF4A-008ENST00000609262540103 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B9VVT8 NR2A1-008 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

HNF4A-003ENST000003729203340107 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WBS7 NR2A1-003 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Protein domains for ENSP00000396216.1

Transcript-based displays