Description

solute carrier family 45, member 2 [Source:HGNC Symbol;Acc:HGNC:16472]

Synonyms

AIM-1, MATP, OCA4

Location
About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 298 variations and maps to 15 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SLC45A2-002ENST000003821022723460aaENSP00000371534
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43308Q9UMX9 NM_001012509
NP_001012527
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC45A2-001ENST000002965891772530aaENSP00000296589
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS3901A0A076YIB8 Q9UMX9 NM_016180
NP_057264
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SLC45A2-003ENST000005093811040243aaENSP00000421100
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS75232D6RGY6 NM_001297417
NP_001284346
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC45A2-005ENST00000510600740246aaENSP00000424010
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6RBP8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SLC45A2-004ENST00000505056739No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Stable ID

ENST00000296589.7

Status

Current

Latest Version

ENST00000296589.7

Release: 79 (current)

Assembly: GRCh38

Database: homo_sapiens_core_79_38

Associated archived IDs for this stable ID version

No associated IDs found

Transcript-based displays