Description
tRNA splicing endonuclease subunit 34 [Source:HGNC Symbol;Acc:HGNC:15506]
Synonyms
SEN34L, SEN34, LENG5
Location
Chromosome CHR_HSCHR19LRC_COX2_CTG3_1: 54,190,866-54,195,141 forward strand.
GRCh38:GL949747.2
About this gene
This gene has 3 transcripts (splice variants), is a member of 1 Ensembl protein family and is associated with 1 phenotype.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| TSEN34-226 | ENST00000622538.1 | 2421 | 310aa | ENSP00000482527 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A024R4N9 Q9BSV6 | NM_001077446 NM_001282332 NP_001070914 NP_001269261 | <p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&c=chr14&o=94517268&t=94547548&g=wgEncodeGencodeCompV19&i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic |
| TSEN34-224 | ENST00000611560.4 | 2297 | 310aa | ENSP00000480422 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A024R4N9 Q9BSV6 | NM_024075 NP_076980 | <p>Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&c=chr14&o=94517268&t=94547548&g=wgEncodeGencodeCompV19&i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:1The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic |
| TSEN34-225 | ENST00000613653.4 | 1915 | 315aa | ENSP00000479563 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E7EQB3 | NM_001282333 NP_001269262 | <p>Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.</p><p>The <a href="https://genome.ucsc.edu/cgi-bin/hgc?hgsid=423831555_sqRhAapgi8atmzzBPBAz8Me5797J&c=chr14&o=94517268&t=94547548&g=wgEncodeGencodeCompV19&i=ENST00000544005.1#tsl" target="_self">Transcript Support Level</a> (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.</p>TSL:2The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic |
