Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LINC02208 ENSG00000250891

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Description

long intergenic non-protein coding RNA 2208 [Source:HGNC Symbol;Acc:HGNC:52978]

Gene Synonyms

HRAT56

Location

Chromosome 5: 118,000,253-118,562,199 reverse strand.

GRCh38:CM000667.2

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	RefSeq Match	Flags
ENST00000660173.1	LINC02208-208	1552	No protein	-	lncRNA		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000506769.1	LINC02208-201	2803	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000665746.1	LINC02208-213	1533	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000659234.1	LINC02208-206	1432	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000654806.1	LINC02208-204	1352	No protein	-	lncRNA		-	-
ENST00000659881.1	LINC02208-207	1277	No protein	-	lncRNA		-	-
ENST00000653787.1	LINC02208-203	1227	No protein	-	lncRNA		-	-
ENST00000666092.1	LINC02208-214	1131	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000661749.1	LINC02208-211	1109	No protein	-	lncRNA		-	-
ENST00000662796.1	LINC02208-212	998	No protein	-	lncRNA		-	-
ENST00000667817.1	LINC02208-215	757	No protein	-	lncRNA		-	-
ENST00000660915.2	LINC02208-209	752	No protein	-	lncRNA		-	-
ENST00000515704.1	LINC02208-202	718	No protein	-	lncRNA		-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000661194.1	LINC02208-210	679	No protein	-	lncRNA		-	-
ENST00000655008.1	LINC02208-205	540	No protein	-	lncRNA		-	-

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Summary

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