Description

PRA1 domain family, member 2 [Source:HGNC Symbol;Acc:HGNC:28911]

Synonyms

JM4

Location
INSDC coordinates

chromosome:GRCh38:CM000685.2:49071156:49074071:1

About this gene

This gene has 3 transcripts (splice variants), 43 orthologues, 1 paralogue, is a member of 1 Ensembl protein family and is associated with 21 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PRAF2-001ENST000005538511334178aaENSP00000451962
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14317A0A024QZ22 O60831 NM_007213
NP_009144
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PRAF2-002ENST00000376386801160aaENSP00000365566
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A6NP52 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PRAF2-003ENST00000618882439No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays