Description

solute carrier family 35 (GDP-fucose transporter), member C1 [Source:HGNC Symbol;Acc:HGNC:20197]

Synonyms

FLJ11320, FUCT1

Location
INSDC coordinates

chromosome:GRCh38:CM000673.2:45804072:45813015:1

About this gene

This gene has 4 transcripts (splice variants), 63 orthologues, is a member of 2 Ensembl protein families and is associated with 3 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SLC35C1-001ENST000003141344171364aaENSP00000313318
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7914B3KQH0 Q96A29 NM_018389
NP_060859
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
SLC35C1-002ENST000004425281756351aaENSP00000412408
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS44575Q96A29 NM_001145265
NM_001145266
NP_001138737
NP_001138738
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC35C1-003ENST00000530471695165aaENSP00000432669
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PPI4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

SLC35C1-004ENST0000052681758272aaENSP00000432145
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PS26 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays