Description

solute carrier family 28 (concentrative nucleoside transporter), member 1 [Source:HGNC Symbol;Acc:HGNC:11001]

Synonyms

CNT1

Location
INSDC coordinates

chromosome:GRCh38:CM000677.2:84884654:84945796:1

About this gene

This gene has 4 transcripts (splice variants), 65 orthologues, 2 paralogues, is a member of 1 Ensembl protein family and is associated with 144 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
SLC28A1-201ENST000003945732769649aaENSP00000378074
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10334O00337 NM_004213
NP_004204
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SLC28A1-001ENST000002867492636649aaENSP00000286749
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10334O00337 NM_001287762
NP_001274691
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

SLC28A1-202ENST000005381772155483aaENSP00000443752
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS73777B7Z3L6 NM_001287761
NP_001274690
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SLC28A1-002ENST000003386021360175aaENSP00000341629
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10335O00337 NM_201651
NP_964014
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).

Gene-based displays