Description

SMEK homolog 1, suppressor of mek1 (Dictyostelium) [Source:HGNC Symbol;Acc:HGNC:20219]

Synonyms

FLFL1, FLJ20707, KIAA2010, MSTP033, smk-1, smk1

Location
INSDC coordinates

chromosome:GRCh38:CM000676.2:91457611:91510554:1

Transcripts

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SMEK1-001ENST000005546844108 bp820 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9895G3V231 G3V4R3 G3V5Z3
Q6IN85
NM_001284280
NM_032560
NP_001271209
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMEK1-003ENST000005554623236 bp594 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS61532G3V5A2 Q6IN85 NM_001284281
NP_001271210
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMEK1-007ENST000005549433369 bp833 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V231 G3V4R3 Q6IN85
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMEK1-012ENST00000555470595 bp199 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
SMEK1-010ENST00000554511580 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V4R3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMEK1-011ENST00000555029571 bp190 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V5A2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMEK1-009ENST00000557018534 bp150 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V231 G3V4R3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMEK1-002ENST000005543902953 bp706 aa (view)
 
Non stop decay
-G3V231 G3V4R3 G3V5Z3
-
SMEK1-005ENST000005543082515 bp543 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V231 G3V4R3 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SMEK1-013ENST00000555718819 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SMEK1-008ENST000005545741944 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMEK1-014ENST00000557382844 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays