novel protein, GGPS1-TBCE readthrough
Chromosome 1: 235,328,570-235,448,952 forward strand.
GRCh38:CM000663.2
This gene has 19 transcripts (splice variants).
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000645655.1 | - | 2624 | 527aa | ENSP00000495202.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1605 | Q15813-1 | - | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENST00000645205.1 | - | 2569 | 527aa | ENSP00000495823.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1605 | Q15813-1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENST00000646624.1 | - | 2513 | 527aa | ENSP00000494575.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1605 | Q15813-1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENST00000647186.1 | - | 2486 | 527aa | ENSP00000494775.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1605 | Q15813-1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENST00000643758.1 | - | 2369 | 61aa | ENSP00000496048.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2R8YF12 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000645351.1 | - | 2010 | 527aa | ENSP00000494319.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS1605 | Q15813-1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, |
| ENST00000647428.1 | - | 1782 | 414aa | ENSP00000495630.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS86060 | A0A2R8Y6Q1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000646281.1 | - | 1587 | 370aa | ENSP00000495225.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A2R8YFL4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000646528.1 | - | 3218 | 174aa | ENSP00000496553.1 | Nonsense mediated decay | A0A2R8YE82 | - | - | |
| ENST00000644055.1 | - | 3165 | 154aa | ENSP00000496307.1 | Nonsense mediated decay | A0A2R8Y4N4 | - | - | |
| ENST00000643410.1 | - | 2725 | 311aa | ENSP00000495030.1 | Nonsense mediated decay | A0A2R8Y809 | - | - | |
| ENST00000645836.1 | - | 2392 | 46aa | ENSP00000493915.1 | Nonsense mediated decay | A0A2R8YH53 | - | - | |
| ENST00000644680.1 | - | 2344 | 71aa | ENSP00000496173.1 | Nonsense mediated decay | A0A2R8Y7P7 | - | - | |
| ENST00000645578.1 | - | 2340 | 46aa | ENSP00000496495.1 | Nonsense mediated decay | A0A2R8YH53 | - | - | |
| ENST00000642431.1 | - | 2328 | 47aa | ENSP00000494990.1 | Nonsense mediated decay | A0A2R8Y551 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000642503.1 | - | 2070 | 46aa | ENSP00000494334.1 | Nonsense mediated decay | A0A2R8YH53 | - | - | |
| ENST00000645069.1 | - | 1220 | 46aa | ENSP00000496644.1 | Nonsense mediated decay | A0A2R8YH53 | - | - | |
| ENST00000643418.1 | - | 988 | 46aa | ENSP00000495711.1 | Nonsense mediated decay | A0A2R8YH53 | - | - | |
| ENST00000644604.1 | - | 2363 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
