Description

zinc finger, BED-type containing 1 [Source:HGNC Symbol;Acc:HGNC:447]

Synonyms

ALTE, DREF, hDREF, KIAA0785, TRAMP

Location

Chromosome X: 2,486,414-2,500,967 reverse strand.

This gene is mapped to the following HAP/PARs:

INSDC coordinates

chromosome:GRCh38:CM000685.2:2486414:2500967:1

Transcripts



This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
ZBED1-201ENST000003812234510694 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14118A0A024RBU4 C9JXP4 O96006
NM_001171136
NM_004729
NP_001164607
NP_004720
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
ZBED1-001ENST000003812224485694 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14118A0A024RBU4 C9JXP4 O96006
-TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
ZBED1-002ENST000003812182832694 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS14118A0A024RBU4 C9JXP4 O96006
NM_001171135
NP_001164606
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
ZBED1-003ENST00000461691947272 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JXP4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

ZBED1-004ENST00000515319905No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays