Description

carbohydrate kinase domain containing [Source:HGNC Symbol;Acc:HGNC:25576]

Synonyms

FLJ10769, LP3298

INSDC coordinates

chromosome:GRCh38:CM000675.2:110615460:110639993:1

About this gene

This gene has 3 transcripts (splice variants), 68 orthologues, is a member of 1 Ensembl protein family and is associated with 55 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
CARKD-001ENST000003099572659390aaENSP00000311984
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9513A0A024RDX4 Q8IW45 NM_001242881
NM_018210
NP_001229810
NP_060680
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P3

PRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CARKD-201ENST000004241852311237aaENSP00000413191
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55903Q8IW45 NM_001242883
NP_001229812
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS ALT2

ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

CARKD-003ENST000004701642377No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--NR_040104
TSL:2

Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays