Description

oligodendrocyte lineage transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:9398]

Synonyms

BHLHB1, bHLHe19, OLIGO2, PRKCBP2, RACK17

Location
INSDC coordinates

chromosome:GRCh38:CM000683.2:33025845:33029196:1

About this gene

This gene has 3 transcripts (splice variants), 40 orthologues, 4 paralogues, is a member of 2 Ensembl protein families and is associated with 30 phenotypes.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
OLIG2-002ENST000003333373262323aaENSP00000331040
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13620Q13516 -TSL:NA

Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

OLIG2-001ENST000003823572578323aaENSP00000371794
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13620Q13516 NM_005806
NP_005797
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

OLIG2-003ENST0000043086057562aaENSP00000391183
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9J444 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:4

Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Gene-based displays